SNP Profiles of SIAL 339   View Data

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 Key

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_Input profile
TTCCACGTCTGGACCCAGCCGGGGATCC
1._RUQ_48
__AC_____AG_GG___
2._SIAL339
__AC_CTGGACGGAG__GGATCC
3._RUQ_48
AACCACACAGGGACGGAGGGGGGGATGG
 1516171819202122232425262728
_Input profile
AACCTTGTCGACCTTTCTGGAGTTACCG
1._RUQ_48
_AC__CGACCT_CTGGAG_ACCG
2._SIAL339
____CGACCT______CG
3._RUQ_48
_CC_ACCGACAGAA_CCAGAAACCG
 2930313233343536373839404142
_Input profile
CCCCAGCCCCGGGGTTTTCTCTCCCGAA
1._RUQ_48
__AGCT____TT___CG_
2._SIAL339
GGCC__CC_GGTT__CT_CG_
3._RUQ_48
_GGAG_GGCCGG_AAAGAGGGCGAA

Input profile: SIAL_339 RUQ_48

 
International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Dapeng Zhang, 2014

1._SIAL_339 RUQ_48

93.8 %
16 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
 Lambert Motilal, 2023

2._SIAL_339 SIAL339

90 %
20 shared markers

Center for Forestry Research and Technology Transfer, Vietnam
Location: CEFORTT
 Jocelyn De Wever et al., 2019

3._SIAL_339 RUQ_48

50 %
36 shared markers

International Cocoa Quarantine Centre, Reading (ICQC,R), United Kingdom
Notes: Reading_Collection
 Mars, 2018

 


  Key to SNP Markers

1TcSNP75 2TcSNP90 3TcSNP144 4TcSNP150 5TcSNP151
6TcSNP174 7TcSNP193 8TcSNP226 9TcSNP230 10TcSNP242
11TcSNP329 12TcSNP364 13TcSNP372 14TcSNP448 15TcSNP469
16TcSNP529 17TcSNP534 18TcSNP560 19TcSNP577 20TcSNP591
21TcSNP602 22TcSNP619 23TcSNP702 24TcSNP723 25TcSNP731
26TcSNP799 27TcSNP823 28TcSNP872 29TcSNP878 30TcSNP891
31TcSNP998 32TcSNP999 33TcSNP1060 34TcSNP1063 35TcSNP1111
36TcSNP1126 37TcSNP1253 38TcSNP1309 39TcSNP1439 40TcSNP1442
41TcSNP1458 42TcSNP1484